HCSGD entry for GDPD1
1. General information
| Official gene symbol | GDPD1 |
|---|---|
| Entrez ID | 284161 |
| Gene full name | glycerophosphodiester phosphodiesterase domain containing 1 |
| Other gene symbols | GDE4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0006071 | Glycerol metabolic process | IEA | biological_process |
| GO:0006629 | Lipid metabolic process | IEA | biological_process |
| GO:0008889 | Glycerophosphodiester phosphodiesterase activity | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0059707192 | 0.9828038296 | 0.2036476684 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3177248422 |
| GSE13712_SHEAR | Up | 0.6333619406 |
| GSE13712_STATIC | Up | 0.7423656735 |
| GSE19018 | Up | 0.2330498650 |
| GSE19899_A1 | Up | 0.5864878410 |
| GSE19899_A2 | Up | 0.1979621920 |
| PubMed_21979375_A1 | Up | 0.8707793134 |
| PubMed_21979375_A2 | Up | 1.1352997485 |
| GSE35957 | Up | 0.0304214952 |
| GSE36640 | Up | 1.4662309047 |
| GSE54402 | Up | 0.1565992406 |
| GSE9593 | Up | 0.0231544089 |
| GSE43922 | Up | 0.5379163713 |
| GSE24585 | Up | 0.5106048144 |
| GSE37065 | Up | 0.2464890149 |
| GSE28863_A1 | Down | -0.2278758420 |
| GSE28863_A2 | Down | -0.1545565184 |
| GSE28863_A3 | Up | 0.0181784150 |
| GSE28863_A4 | Down | -0.0560213310 |
| GSE48662 | Up | 0.0497684606 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT016859 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
