HCSGD entry for PGP
1. General information
| Official gene symbol | PGP |
|---|---|
| Entrez ID | 283871 |
| Gene full name | phosphoglycolate phosphatase |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005975 | Carbohydrate metabolic process | IEA | biological_process |
| GO:0008967 | Phosphoglycolate phosphatase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0663595608 | 0.8429055127 | 0.5548443456 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2519624795 |
| GSE13712_SHEAR | Up | 0.3647376785 |
| GSE13712_STATIC | Down | -0.0785256773 |
| GSE19018 | Down | -0.1055083885 |
| GSE19899_A1 | Up | 0.1105532719 |
| GSE19899_A2 | Up | 0.7206390242 |
| PubMed_21979375_A1 | Up | 1.3813878651 |
| PubMed_21979375_A2 | Up | 0.7713087387 |
| GSE35957 | Down | -0.5110554039 |
| GSE36640 | Up | 0.0748866064 |
| GSE54402 | Up | 0.2744871083 |
| GSE9593 | Down | -0.5007571788 |
| GSE43922 | Up | 0.2407337260 |
| GSE24585 | Down | -0.3824935674 |
| GSE37065 | Down | -0.1267207016 |
| GSE28863_A1 | Down | -0.2017376009 |
| GSE28863_A2 | Up | 0.1315803636 |
| GSE28863_A3 | Up | 0.1743505116 |
| GSE28863_A4 | Up | 0.0930314084 |
| GSE48662 | Up | 0.4184158114 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-93-5p | MIMAT0000093 | MIRT048822 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
