HCSGD entry for CHAMP1
1. General information
| Official gene symbol | CHAMP1 |
|---|---|
| Entrez ID | 283489 |
| Gene full name | chromosome alignment maintaining phosphoprotein 1 |
| Other gene symbols | C13orf8 CAMP CHAMP ZNF828 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000777 | Condensed chromosome kinetochore | IDA | cellular_component |
| GO:0000793 | Condensed chromosome | IDA | cellular_component |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005819 | Spindle | IDA | cellular_component |
| GO:0031134 | Sister chromatid biorientation | IMP | biological_process |
| GO:0034501 | Protein localization to kinetochore | IMP | biological_process |
| GO:0035372 | Protein localization to microtubule | IMP | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
| GO:0051315 | Attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1991039968 | 0.3340015311 | 0.8618698374 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1238889878 |
| GSE13712_SHEAR | Up | 0.3745618878 |
| GSE13712_STATIC | Up | 0.1233255465 |
| GSE19018 | Down | -0.8788652463 |
| GSE19899_A1 | Up | 0.3170137763 |
| GSE19899_A2 | Up | 0.7031419024 |
| PubMed_21979375_A1 | Down | -0.2061128005 |
| PubMed_21979375_A2 | Up | 0.9140379358 |
| GSE35957 | Up | 0.0586506761 |
| GSE36640 | Down | -0.4767180900 |
| GSE54402 | Up | 0.0616917731 |
| GSE9593 | Down | -0.2992492600 |
| GSE43922 | Up | 0.0057606090 |
| GSE24585 | Up | 0.0704399219 |
| GSE37065 | Down | -0.0028414515 |
| GSE28863_A1 | Up | 0.1776025524 |
| GSE28863_A2 | Up | 0.1418985830 |
| GSE28863_A3 | Down | -0.2238224901 |
| GSE28863_A4 | Up | 0.0556272323 |
| GSE48662 | Down | -0.5892136858 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-378a-3p | MIMAT0000732 | MIRT019662 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-1 | MIMAT0000416 | MIRT023605 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-7-5p | MIMAT0000252 | MIRT025705 | Microarray | Functional MTI (Weak) | 19073608 |
| hsa-miR-101-3p | MIMAT0000099 | MIRT027275 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-877-5p | MIMAT0004949 | MIRT037237 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT039717 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
