HCSGD entry for B4GALNT3
1. General information
| Official gene symbol | B4GALNT3 |
|---|---|
| Entrez ID | 283358 |
| Gene full name | beta-1,4-N-acetyl-galactosaminyl transferase 3 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0008152 | Metabolic process | IDA | biological_process |
| GO:0008376 | Acetylgalactosaminyltransferase activity | IDA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016758 | Transferase activity, transferring hexosyl groups | IEA | molecular_function |
| GO:0032580 | Golgi cisterna membrane | IEA | cellular_component |
| GO:0033842 | N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8160203754 | 0.6389785722 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0763913958 |
| GSE13712_SHEAR | Up | 0.0135277448 |
| GSE13712_STATIC | Down | -0.1385833624 |
| GSE19018 | Up | 0.0891050374 |
| GSE19899_A1 | Up | 0.0566506056 |
| GSE19899_A2 | Up | 0.1272263378 |
| PubMed_21979375_A1 | Down | -0.0686788766 |
| PubMed_21979375_A2 | Up | 0.0277877432 |
| GSE35957 | Up | 0.1513226723 |
| GSE36640 | Up | 0.0413061203 |
| GSE54402 | Down | -0.0032722570 |
| GSE9593 | Down | -0.0018436745 |
| GSE43922 | Up | 0.0397362706 |
| GSE24585 | Down | -0.6612529724 |
| GSE37065 | Up | 0.1107381488 |
| GSE28863_A1 | Down | -0.0977509718 |
| GSE28863_A2 | Down | -0.0087202414 |
| GSE28863_A3 | Up | 0.1761198276 |
| GSE28863_A4 | Up | 0.0596535012 |
| GSE48662 | Up | 0.0268801982 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-423-3p | MIMAT0001340 | MIRT042532 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-378a-3p | MIMAT0000732 | MIRT043861 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT052526 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
