HCSGD entry for GNAT2

1. General information

Official gene symbolGNAT2
Entrez ID2780
Gene full nameguanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2
Other gene symbolsACHM4 GNATC
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001580Detection of chemical stimulus involved in sensory perception of bitter tasteIBAbiological_process
GO:0001664G-protein coupled receptor bindingIBAmolecular_function
GO:0001750Photoreceptor outer segmentIDA ISScellular_component
GO:0001917Photoreceptor inner segmentIDAcellular_component
GO:0003924GTPase activityIBAmolecular_function
GO:0004871Signal transducer activityIBAmolecular_function
GO:0005525GTP bindingNASmolecular_function
GO:0005834Heterotrimeric G-protein complexIBA NAScellular_component
GO:0005886Plasma membraneTAScellular_component
GO:0007186G-protein coupled receptor signaling pathwayNASbiological_process
GO:0007188Adenylate cyclase-modulating G-protein coupled receptor signaling pathwayIBAbiological_process
GO:0007204Positive regulation of cytosolic calcium ion concentrationIEAbiological_process
GO:0007601Visual perceptionNASbiological_process
GO:0007602PhototransductionNASbiological_process
GO:0008020G-protein coupled photoreceptor activityNASmolecular_function
GO:0009642Response to light intensityIEAbiological_process
GO:0031234Extrinsic component of cytoplasmic side of plasma membraneIBAcellular_component
GO:0031683G-protein beta/gamma-subunit complex bindingIBAmolecular_function
GO:0042622Photoreceptor outer segment membraneISScellular_component
GO:0046549Retinal cone cell developmentIEAbiological_process
GO:0046872Metal ion bindingIEAmolecular_function
GO:0050908Detection of light stimulus involved in visual perceptionIMPbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.52159302460.68895107710.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0756216720
GSE13712_SHEARDown-0.2857307280
GSE13712_STATICDown-0.1243955584
GSE19018Up0.0763200856
GSE19899_A1Up0.1205161540
GSE19899_A2Up0.1843788626
PubMed_21979375_A1Up0.7183101820
PubMed_21979375_A2Up0.2657017247
GSE35957Up0.0933353440
GSE36640Up0.5495676896
GSE54402Up0.2527941989
GSE9593Up0.0087976199
GSE43922Up0.0219377356
GSE24585Down-0.1170332212
GSE37065Down-0.0956703916
GSE28863_A1Up0.0083750244
GSE28863_A2Down-0.1186611876
GSE28863_A3Down-0.0395730627
GSE28863_A4Down-0.2460174071
GSE48662Up0.0397222136

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-9-5pMIMAT0000441MIRT021422MicroarrayFunctional MTI (Weak)17612493
hsa-miR-1MIMAT0000416MIRT023994Proteomics;MicroarrayFunctional MTI (Weak)18668037
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.