HCSGD entry for BRPF3
1. General information
| Official gene symbol | BRPF3 |
|---|---|
| Entrez ID | 27154 |
| Gene full name | bromodomain and PHD finger containing, 3 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0002576 | Platelet degranulation | TAS | biological_process |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005576 | Extracellular region | TAS | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0007596 | Blood coagulation | TAS | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0030168 | Platelet activation | TAS | biological_process |
| GO:0043966 | Histone H3 acetylation | IDA | biological_process |
| GO:0070776 | MOZ/MORF histone acetyltransferase complex | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2451064777 | 0.6799966909 | 0.9337542547 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0628273141 |
| GSE13712_SHEAR | Up | 0.0705333426 |
| GSE13712_STATIC | Down | -0.0124689921 |
| GSE19018 | Down | -0.3450582110 |
| GSE19899_A1 | Down | -0.0009877837 |
| GSE19899_A2 | Up | 0.0344619513 |
| PubMed_21979375_A1 | Up | 0.1113882468 |
| PubMed_21979375_A2 | Up | 0.0967699804 |
| GSE35957 | Up | 0.2836675868 |
| GSE36640 | Up | 0.1142388108 |
| GSE54402 | Up | 0.5433258429 |
| GSE9593 | Up | 0.0591970600 |
| GSE43922 | Up | 0.0485383422 |
| GSE24585 | Up | 0.3856789367 |
| GSE37065 | Up | 0.0407237337 |
| GSE28863_A1 | Up | 0.3248843729 |
| GSE28863_A2 | Up | 0.5348147631 |
| GSE28863_A3 | Down | -0.3174472024 |
| GSE28863_A4 | Down | -0.4350138256 |
| GSE48662 | Down | -0.0509811590 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT001563 | pSILAC | Functional MTI (Weak) | 18668040 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT001563 | Proteomics//Western blot | Functional MTI | 17668390 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT001563 | Proteomics | Functional MTI (Weak) | 17588946 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT001563 | Proteomics;Other | Functional MTI (Weak) | 16675453 |
| hsa-miR-1 | MIMAT0000416 | MIRT024014 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT036958 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT051909 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
