HCSGD entry for ST6GALNAC4
1. General information
| Official gene symbol | ST6GALNAC4 |
|---|---|
| Entrez ID | 27090 |
| Gene full name | ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 |
| Other gene symbols | IV SIAT3-C SIAT3C SIAT7-D SIAT7D ST6GALNACIV ST6GalNAc |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005794 | Golgi apparatus | IDA IEA | cellular_component |
| GO:0006486 | Protein glycosylation | IEA | biological_process |
| GO:0006664 | Glycolipid metabolic process | TAS | biological_process |
| GO:0008373 | Sialyltransferase activity | IEA TAS | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016266 | O-glycan processing | TAS | biological_process |
| GO:0043687 | Post-translational protein modification | TAS | biological_process |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
| GO:0047290 | (alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3)-N-acetyl-galactosaminide 6-alpha-sialyltransferase activity | IEA | molecular_function |
| GO:0097503 | Sialylation | TAS | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0457345580 | 0.8378370313 | 0.4742737298 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1759114672 |
| GSE13712_SHEAR | Down | -0.5403214808 |
| GSE13712_STATIC | Down | -0.0780420452 |
| GSE19018 | Up | 0.0729249616 |
| GSE19899_A1 | Down | -0.0080888734 |
| GSE19899_A2 | Up | 0.7378425270 |
| PubMed_21979375_A1 | Up | 1.4024822912 |
| PubMed_21979375_A2 | Up | 0.9419554471 |
| GSE35957 | Up | 0.0323722295 |
| GSE36640 | Down | -0.0468873116 |
| GSE54402 | Up | 0.4148050064 |
| GSE9593 | Down | -0.0575119227 |
| GSE43922 | Up | 0.3681501527 |
| GSE24585 | Down | -0.3202850079 |
| GSE37065 | Up | 0.3217484222 |
| GSE28863_A1 | Up | 0.0961893400 |
| GSE28863_A2 | Down | -0.2917270510 |
| GSE28863_A3 | Up | 0.2455705401 |
| GSE28863_A4 | Down | -0.0085589445 |
| GSE48662 | Up | 0.2482972502 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-122-5p | MIMAT0000421 | MIRT023399 | Microarray | Functional MTI (Weak) | 17612493 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
