HCSGD entry for TSPAN13
1. General information
| Official gene symbol | TSPAN13 |
|---|---|
| Entrez ID | 27075 |
| Gene full name | tetraspanin 13 |
| Other gene symbols | NET-6 NET6 TM4SF13 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005887 | Integral component of plasma membrane | TAS | cellular_component |
| GO:0016020 | Membrane | TAS | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0001709282 | 0.0268127617 | 0.0389084746 | 0.3134813138 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 1.0845964576 |
| GSE13712_SHEAR | Down | -0.8604269464 |
| GSE13712_STATIC | Down | -0.3094253100 |
| GSE19018 | Up | 1.3905550697 |
| GSE19899_A1 | Up | 2.6398379890 |
| GSE19899_A2 | Up | 1.2511449361 |
| PubMed_21979375_A1 | Up | 1.9399551473 |
| PubMed_21979375_A2 | Up | 1.3687744067 |
| GSE35957 | Down | -1.7325405536 |
| GSE36640 | Up | 2.4865585481 |
| GSE54402 | Up | 1.8068358750 |
| GSE9593 | Up | 0.4095055431 |
| GSE43922 | Up | 1.5700722558 |
| GSE24585 | Down | -0.1403852983 |
| GSE37065 | Up | 0.0752193656 |
| GSE28863_A1 | Down | -1.4903080367 |
| GSE28863_A2 | Up | 0.9816162731 |
| GSE28863_A3 | Down | -1.7818817959 |
| GSE28863_A4 | Down | -0.3662624700 |
| GSE48662 | Up | 0.0121731222 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-128-3p | MIMAT0000424 | MIRT021889 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT028805 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
