HCSGD entry for GJB1
1. General information
| Official gene symbol | GJB1 |
|---|---|
| Entrez ID | 2705 |
| Gene full name | gap junction protein, beta 1, 32kDa |
| Other gene symbols | CMTX CMTX1 CX32 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005243 | Gap junction channel activity | IEA | molecular_function |
| GO:0005783 | Endoplasmic reticulum | IEA | cellular_component |
| GO:0005789 | Endoplasmic reticulum membrane | TAS | cellular_component |
| GO:0005922 | Connexon complex | IEA | cellular_component |
| GO:0006810 | Transport | TAS | biological_process |
| GO:0007154 | Cell communication | IEA | biological_process |
| GO:0007267 | Cell-cell signaling | TAS | biological_process |
| GO:0007399 | Nervous system development | TAS | biological_process |
| GO:0015868 | Purine ribonucleotide transport | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016264 | Gap junction assembly | TAS | biological_process |
| GO:0042803 | Protein homodimerization activity | IEA | molecular_function |
| GO:0051259 | Protein oligomerization | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3210955853 | 0.8871227841 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2491860486 |
| GSE13712_SHEAR | Down | -0.1295065646 |
| GSE13712_STATIC | Up | 0.1866245042 |
| GSE19018 | Up | 0.0869112602 |
| GSE19899_A1 | Up | 0.2221082309 |
| GSE19899_A2 | Up | 0.1889455167 |
| PubMed_21979375_A1 | Up | 0.1299269434 |
| PubMed_21979375_A2 | Up | 0.2277713448 |
| GSE35957 | Up | 0.3607721433 |
| GSE36640 | Up | 0.1109981507 |
| GSE54402 | Up | 0.0810140664 |
| GSE9593 | Down | -0.0295892858 |
| GSE43922 | Up | 0.0097731080 |
| GSE24585 | Up | 0.1097139878 |
| GSE37065 | Up | 0.0015489776 |
| GSE28863_A1 | Down | -0.0303060431 |
| GSE28863_A2 | Up | 0.0018451558 |
| GSE28863_A3 | Up | 0.2778986955 |
| GSE28863_A4 | Up | 0.0115074206 |
| GSE48662 | Down | -0.0708269944 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018652 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
