HCSGD entry for SND1
1. General information
| Official gene symbol | SND1 |
|---|---|
| Entrez ID | 27044 |
| Gene full name | staphylococcal nuclease and tudor domain containing 1 |
| Other gene symbols | TDRD11 p100 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003712 | Transcription cofactor activity | TAS | molecular_function |
| GO:0004518 | Nuclease activity | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005739 | Mitochondrion | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0016032 | Viral process | IEA | biological_process |
| GO:0016442 | RISC complex | IEA | cellular_component |
| GO:0016788 | Hydrolase activity, acting on ester bonds | IEA | molecular_function |
| GO:0031047 | Gene silencing by RNA | IEA | biological_process |
| GO:0042470 | Melanosome | IEA | cellular_component |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7149001140 | 0.3328102542 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0251465763 |
| GSE13712_SHEAR | Down | -0.3995822263 |
| GSE13712_STATIC | Up | 0.0569606886 |
| GSE19018 | Up | 0.2853422231 |
| GSE19899_A1 | Down | -0.3178200950 |
| GSE19899_A2 | Down | -0.0844672534 |
| PubMed_21979375_A1 | Down | -0.2193060782 |
| PubMed_21979375_A2 | Up | 0.2540280541 |
| GSE35957 | Down | -0.1930523460 |
| GSE36640 | Down | -0.0174849207 |
| GSE54402 | Up | 0.1228098345 |
| GSE9593 | Up | 0.0269710713 |
| GSE43922 | Down | -0.0846878226 |
| GSE24585 | Up | 0.0669590963 |
| GSE37065 | Down | -0.2350758754 |
| GSE28863_A1 | Up | 0.3168839854 |
| GSE28863_A2 | Up | 0.4384671131 |
| GSE28863_A3 | Down | -0.2335373668 |
| GSE28863_A4 | Down | -0.1224373178 |
| GSE48662 | Down | -0.2580242501 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029612 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT036835 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT048839 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT051278 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
