HCSGD entry for PKD2L2
1. General information
| Official gene symbol | PKD2L2 |
|---|---|
| Entrez ID | 27039 |
| Gene full name | polycystic kidney disease 2-like 2 |
| Other gene symbols | TRPP5 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005262 | Calcium channel activity | IBA | molecular_function |
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0006812 | Cation transport | IBA | biological_process |
| GO:0008150 | Biological_process | ND | biological_process |
| GO:0016021 | Integral component of membrane | TAS | cellular_component |
| GO:0030001 | Metal ion transport | IBA | biological_process |
| GO:0034220 | Ion transmembrane transport | IBA | biological_process |
| GO:0050982 | Detection of mechanical stimulus | IBA | biological_process |
| GO:0055085 | Transmembrane transport | IBA | biological_process |
| GO:0070588 | Calcium ion transmembrane transport | IBA | biological_process |
| GO:0072511 | Divalent inorganic cation transport | IBA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8554911440 | 0.5948926067 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0393818021 |
| GSE13712_SHEAR | Up | 0.0241555939 |
| GSE13712_STATIC | Up | 0.0882036240 |
| GSE19018 | Down | -0.0082111359 |
| GSE19899_A1 | Up | 0.0090143959 |
| GSE19899_A2 | Down | -0.2124210836 |
| PubMed_21979375_A1 | Down | -0.4661293999 |
| PubMed_21979375_A2 | Up | 0.0097323491 |
| GSE35957 | Up | 0.0870782887 |
| GSE36640 | Up | 0.2450289333 |
| GSE54402 | Down | -0.3711406544 |
| GSE9593 | Up | 0.0514300697 |
| GSE43922 | Up | 0.0138777043 |
| GSE24585 | Up | 0.2199055999 |
| GSE37065 | Up | 0.0314411273 |
| GSE28863_A1 | Down | -0.1722557312 |
| GSE28863_A2 | Up | 0.0142380826 |
| GSE28863_A3 | Up | 0.1121944030 |
| GSE28863_A4 | Down | -0.1173241006 |
| GSE48662 | Down | -0.0342739032 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
