HCSGD entry for RNF11
1. General information
| Official gene symbol | RNF11 |
|---|---|
| Entrez ID | 26994 |
| Gene full name | ring finger protein 11 |
| Other gene symbols | SID1669 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000151 | Ubiquitin ligase complex | IDA | cellular_component |
| GO:0003677 | DNA binding | TAS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005769 | Early endosome | IEA | cellular_component |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0042787 | Protein ubiquitination involved in ubiquitin-dependent protein catabolic process | IDA | biological_process |
| GO:0055037 | Recycling endosome | IEA | cellular_component |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0130126819 | 0.9926866912 | 0.2841881426 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0928032513 |
| GSE13712_SHEAR | Up | 0.0651003680 |
| GSE13712_STATIC | Up | 0.1742186293 |
| GSE19018 | Up | 0.2744860582 |
| GSE19899_A1 | Up | 0.4213329870 |
| GSE19899_A2 | Up | 0.5027982881 |
| PubMed_21979375_A1 | Up | 0.6276707492 |
| PubMed_21979375_A2 | Up | 0.3731952434 |
| GSE35957 | Up | 0.4254588700 |
| GSE36640 | Up | 0.8875111568 |
| GSE54402 | Up | 0.1313446489 |
| GSE9593 | Up | 0.5189810931 |
| GSE43922 | Up | 0.1615272901 |
| GSE24585 | Up | 0.3597225456 |
| GSE37065 | Down | -0.1317671652 |
| GSE28863_A1 | Up | 0.2609537694 |
| GSE28863_A2 | Up | 0.6221407690 |
| GSE28863_A3 | Up | 0.2337903534 |
| GSE28863_A4 | Down | -0.2874723937 |
| GSE48662 | Down | -0.0219177994 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-340-5p | MIMAT0004692 | MIRT019648 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-24-3p | MIMAT0000080 | MIRT030623 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT031075 | Microarray | Functional MTI (Weak) | 20048743 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT031075 | Microarray | Functional MTI (Weak) | 18591254 |
| hsa-miR-19b-3p | MIMAT0000074 | MIRT031299 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-484 | MIMAT0002174 | MIRT042387 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
