HCSGD entry for SEC22A
1. General information
| Official gene symbol | SEC22A |
|---|---|
| Entrez ID | 26984 |
| Gene full name | SEC22 vesicle trafficking protein homolog A (S. cerevisiae) |
| Other gene symbols | SEC22L2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000149 | SNARE binding | IBA | molecular_function |
| GO:0005215 | Transporter activity | TAS | molecular_function |
| GO:0005484 | SNAP receptor activity | IBA | molecular_function |
| GO:0005789 | Endoplasmic reticulum membrane | IEA | cellular_component |
| GO:0006810 | Transport | IEA | biological_process |
| GO:0006887 | Exocytosis | IBA | biological_process |
| GO:0006888 | ER to Golgi vesicle-mediated transport | IBA IEA | biological_process |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0031201 | SNARE complex | IBA | cellular_component |
| GO:0048280 | Vesicle fusion with Golgi apparatus | IBA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8645072946 | 0.1901515900 | 0.9999902473 | 0.8452930248 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0172517189 |
| GSE13712_SHEAR | Down | -0.1716246673 |
| GSE13712_STATIC | Up | 0.2648549805 |
| GSE19018 | Down | -0.0548874080 |
| GSE19899_A1 | Up | 0.2591485293 |
| GSE19899_A2 | Down | -0.2772113163 |
| PubMed_21979375_A1 | Down | -0.0918305803 |
| PubMed_21979375_A2 | Down | -0.3198628450 |
| GSE35957 | Up | 0.3165344288 |
| GSE36640 | Up | 0.3505264602 |
| GSE54402 | Down | -0.3555336259 |
| GSE9593 | Down | -0.0712601658 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Down | -0.0120448651 |
| GSE28863_A2 | Up | 0.2541285938 |
| GSE28863_A3 | Down | -0.7300497337 |
| GSE28863_A4 | Down | -0.1880026141 |
| GSE48662 | Down | -0.4644807324 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029213 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
