HCSGD entry for GGTA1P
1. General information
| Official gene symbol | GGTA1P |
|---|---|
| Entrez ID | 2681 |
| Gene full name | glycoprotein, alpha-galactosyltransferase 1 pseudogene |
| Other gene symbols | GGTA GGTA1 GLYT2 a1/3GTP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003840 | Gamma-glutamyltransferase activity | TAS | molecular_function |
| GO:0005975 | Carbohydrate metabolic process | IEA | biological_process |
| GO:0006749 | Glutathione metabolic process | TAS | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016758 | Transferase activity, transferring hexosyl groups | IEA | molecular_function |
| GO:0019370 | Leukotriene biosynthetic process | ISS | biological_process |
| GO:0031362 | Anchored component of external side of plasma membrane | TAS | cellular_component |
| GO:0032580 | Golgi cisterna membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5198458265 | 0.3391448311 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.4699341770 |
| GSE13712_SHEAR | Down | -1.1407650477 |
| GSE13712_STATIC | Down | -0.5494244521 |
| GSE19018 | Up | 0.3292873360 |
| GSE19899_A1 | Up | 0.0215734148 |
| GSE19899_A2 | Up | 0.0367113085 |
| PubMed_21979375_A1 | Up | 0.3246291931 |
| PubMed_21979375_A2 | Down | -0.3587731994 |
| GSE35957 | Up | 0.2397031355 |
| GSE36640 | Up | 0.6149053575 |
| GSE54402 | Down | -0.1226696925 |
| GSE9593 | Down | -0.1409596223 |
| GSE43922 | Up | 0.0151010817 |
| GSE24585 | Up | 0.0519387657 |
| GSE37065 | Up | 0.0479612190 |
| GSE28863_A1 | Down | -0.1409374498 |
| GSE28863_A2 | Down | -0.0981706619 |
| GSE28863_A3 | Up | 0.0846124030 |
| GSE28863_A4 | Up | 0.0461458518 |
| GSE48662 | Down | -0.0128026277 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
