HCSGD entry for HAVCR1
1. General information
| Official gene symbol | HAVCR1 |
|---|---|
| Entrez ID | 26762 |
| Gene full name | hepatitis A virus cellular receptor 1 |
| Other gene symbols | HAVCR HAVCR-1 KIM-1 KIM1 TIM TIM-1 TIM1 TIMD-1 TIMD1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001618 | Virus receptor activity | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016032 | Viral process | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6940683029 | 0.8207264846 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0408881078 |
| GSE13712_SHEAR | Down | -0.0325616388 |
| GSE13712_STATIC | Down | -0.1006507845 |
| GSE19018 | Up | 0.0593638414 |
| GSE19899_A1 | Up | 0.0211537379 |
| GSE19899_A2 | Up | 0.0239216565 |
| PubMed_21979375_A1 | Down | -0.0602007891 |
| PubMed_21979375_A2 | Down | -0.2043079230 |
| GSE35957 | Down | -0.0677319498 |
| GSE36640 | Up | 0.0603141147 |
| GSE54402 | Up | 0.1732708390 |
| GSE9593 | Up | 0.2651567061 |
| GSE43922 | Up | 0.0118004408 |
| GSE24585 | Up | 0.0386338149 |
| GSE37065 | Up | 0.0568384719 |
| GSE28863_A1 | Up | 0.0379422685 |
| GSE28863_A2 | Up | 0.1633758985 |
| GSE28863_A3 | Up | 0.1028965849 |
| GSE28863_A4 | Down | -0.0055226567 |
| GSE48662 | Up | 0.0912056191 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018340 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-148b-3p | MIMAT0000759 | MIRT019312 | Microarray | Functional MTI (Weak) | 17612493 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
