HCSGD entry for NPAS4
1. General information
| Official gene symbol | NPAS4 |
|---|---|
| Entrez ID | 266743 |
| Gene full name | neuronal PAS domain protein 4 |
| Other gene symbols | Le-PAS NXF PASD10 bHLHe79 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0004871 | Signal transducer activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005667 | Transcription factor complex | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0045944 | Positive regulation of transcription from RNA polymerase II promoter | IEA | biological_process |
| GO:0046982 | Protein heterodimerization activity | IEA | molecular_function |
| GO:0046983 | Protein dimerization activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9209464344 | 0.5296704874 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2757586547 |
| GSE13712_SHEAR | Down | -0.0033205454 |
| GSE13712_STATIC | Down | -0.0502934123 |
| GSE19018 | Down | -0.1232888061 |
| GSE19899_A1 | Down | -0.0520291752 |
| GSE19899_A2 | Up | 0.0388452254 |
| PubMed_21979375_A1 | Up | 0.2088466379 |
| PubMed_21979375_A2 | Up | 0.0008675247 |
| GSE35957 | Up | 0.0215000811 |
| GSE36640 | Down | -0.0102465196 |
| GSE54402 | Down | -0.1024503798 |
| GSE9593 | Down | -0.0778696643 |
| GSE43922 | Up | 0.0666570143 |
| GSE24585 | Up | 0.1184216604 |
| GSE37065 | Down | -0.0975111032 |
| GSE28863_A1 | Down | -0.0133379487 |
| GSE28863_A2 | Up | 0.0632860790 |
| GSE28863_A3 | Up | 0.2138538772 |
| GSE28863_A4 | Down | -0.0074627678 |
| GSE48662 | Down | -0.1465197257 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
