HCSGD entry for CHIC2
1. General information
| Official gene symbol | CHIC2 |
|---|---|
| Entrez ID | 26511 |
| Gene full name | cysteine-rich hydrophobic domain 2 |
| Other gene symbols | BTL |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005575 | Cellular_component | ND | cellular_component |
| GO:0005798 | Golgi-associated vesicle | IEA | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0008150 | Biological_process | ND | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0089812697 | 0.9103055773 | 0.2422090164 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0431943016 |
| GSE13712_SHEAR | Up | 0.4572007108 |
| GSE13712_STATIC | Up | 0.2163533560 |
| GSE19018 | Up | 0.2105686753 |
| GSE19899_A1 | Up | 0.8718684258 |
| GSE19899_A2 | Up | 0.6424673512 |
| PubMed_21979375_A1 | Up | 1.0817020691 |
| PubMed_21979375_A2 | Up | 0.6176779409 |
| GSE35957 | Up | 0.0050417012 |
| GSE36640 | Up | 1.1662880312 |
| GSE54402 | Up | 0.8727515727 |
| GSE9593 | Up | 0.6240454616 |
| GSE43922 | Down | -0.0009143370 |
| GSE24585 | Up | 0.0653208712 |
| GSE37065 | Up | 0.0307019549 |
| GSE28863_A1 | Down | -0.2360419016 |
| GSE28863_A2 | Up | 0.2239032423 |
| GSE28863_A3 | Down | -0.4144210033 |
| GSE28863_A4 | Down | -0.3882273576 |
| GSE48662 | Up | 0.6739741935 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-197-3p | MIMAT0000227 | MIRT004146 | Microarray | Functional MTI (Weak) | 16822819 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT023146 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-29c-3p | MIMAT0000681 | MIRT044239 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
