HCSGD entry for GCNT2
1. General information
| Official gene symbol | GCNT2 |
|---|---|
| Entrez ID | 2651 |
| Gene full name | glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) |
| Other gene symbols | CCAT GCNT2C GCNT5 IGNT II NACGT1 NAGCT1 ULG3 bA360O19.2 bA421M1.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | IEA | cellular_component |
| GO:0006024 | Glycosaminoglycan biosynthetic process | TAS | biological_process |
| GO:0006486 | Protein glycosylation | IEA | biological_process |
| GO:0007275 | Multicellular organismal development | TAS | biological_process |
| GO:0008109 | N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity | IEA | molecular_function |
| GO:0016020 | Membrane | TAS | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0055441017 | 0.9904836100 | 0.1964014805 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0204217213 |
| GSE13712_SHEAR | Down | -0.0168083109 |
| GSE13712_STATIC | Up | 0.4490576380 |
| GSE19018 | Up | 0.0181582263 |
| GSE19899_A1 | Up | 0.1047455206 |
| GSE19899_A2 | Up | 1.1240500930 |
| PubMed_21979375_A1 | Up | 1.8202326317 |
| PubMed_21979375_A2 | Up | 0.8733411584 |
| GSE35957 | Down | -0.1636461560 |
| GSE36640 | Up | 3.5936487809 |
| GSE54402 | Up | 0.5533848607 |
| GSE9593 | Up | 0.0088799323 |
| GSE43922 | Up | 0.4444914575 |
| GSE24585 | Up | 0.7836763922 |
| GSE37065 | Up | 0.0364117985 |
| GSE28863_A1 | Down | -0.0682544070 |
| GSE28863_A2 | Up | 0.0770363298 |
| GSE28863_A3 | Up | 0.1407460018 |
| GSE28863_A4 | Up | 0.0728222842 |
| GSE48662 | Down | -0.0574381341 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT016749 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-128-3p | MIMAT0000424 | MIRT021899 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027404 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT028842 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
