HCSGD entry for GBAS
1. General information
| Official gene symbol | GBAS |
|---|---|
| Entrez ID | 2631 |
| Gene full name | glioblastoma amplified sequence |
| Other gene symbols | NIPSNAP2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005739 | Mitochondrion | IDA ISS | cellular_component |
| GO:0005887 | Integral component of plasma membrane | TAS | cellular_component |
| GO:0006119 | Oxidative phosphorylation | IMP | biological_process |
| GO:0006754 | ATP biosynthetic process | IMP | biological_process |
| GO:0016020 | Membrane | TAS | cellular_component |
| GO:2000984 | Negative regulation of ATP citrate synthase activity | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9902164887 | 0.0064075833 | 0.9999902473 | 0.1630028019 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.5784994132 |
| GSE13712_SHEAR | Down | -0.4611349465 |
| GSE13712_STATIC | Down | -0.1513197998 |
| GSE19018 | Up | 0.4366051759 |
| GSE19899_A1 | Down | -0.7090467180 |
| GSE19899_A2 | Down | -0.4948128370 |
| PubMed_21979375_A1 | Down | -0.1540111704 |
| PubMed_21979375_A2 | Down | -0.3956673922 |
| GSE35957 | Down | -0.3953459136 |
| GSE36640 | Down | -0.6472678498 |
| GSE54402 | Up | 0.0036840080 |
| GSE9593 | Down | -0.2750831689 |
| GSE43922 | Down | -0.8568123687 |
| GSE24585 | Down | -0.1705279077 |
| GSE37065 | Down | -0.1419016658 |
| GSE28863_A1 | Up | 0.0872139845 |
| GSE28863_A2 | Up | 0.1239771139 |
| GSE28863_A3 | Down | -0.5842027877 |
| GSE28863_A4 | Down | -0.3593228913 |
| GSE48662 | Down | -0.5177668412 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-373-3p | MIMAT0000726 | MIRT002496 | Microarray//Microarray;Other | Functional MTI (Weak) | 15685193 |
| hsa-miR-132-3p | MIMAT0000426 | MIRT021760 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-24-3p | MIMAT0000080 | MIRT030521 | Microarray | Functional MTI (Weak) | 19748357 |
| hsa-miR-10b-5p | MIMAT0000254 | MIRT047406 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-10a-5p | MIMAT0000253 | MIRT047523 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049391 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-373-3p | MIMAT0000726 | NA | hsa-miR-373 | 15685193 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
