HCSGD entry for PCDHB5

1. General information

Official gene symbolPCDHB5
Entrez ID26167
Gene full nameprotocadherin beta 5
Other gene symbolsPCDH-BETA5
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005509Calcium ion bindingIEAmolecular_function
GO:0005886Plasma membraneIEAcellular_component
GO:0007156Homophilic cell adhesionIEAbiological_process
GO:0007268Synaptic transmissionTASbiological_process
GO:0007416Synapse assemblyTASbiological_process
GO:0016021Integral component of membraneNAScellular_component
GO:0016339Calcium-dependent cell-cell adhesionNASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.74573581170.02446713650.99999024730.3009343458

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.2758765839
GSE13712_SHEARDown-0.6704636711
GSE13712_STATICDown-0.0960695533
GSE19018Down-0.0455287470
GSE19899_A1Up0.0296693135
GSE19899_A2Down-2.1847254291
PubMed_21979375_A1Down-0.2964352141
PubMed_21979375_A2Down-0.8565018173
GSE35957Down-0.3332287759
GSE36640Up0.2053491902
GSE54402Down-0.6423261532
GSE9593Up0.3407282085
GSE43922Down-0.9543820436
GSE24585Up0.5549246789
GSE37065Down-0.0696242855
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662Down-0.0086627245

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.