HCSGD entry for ABCA12

1. General information

Official gene symbolABCA12
Entrez ID26154
Gene full nameATP-binding cassette, sub-family A (ABC1), member 12
Other gene symbolsARCI4A ARCI4B ICR2B LI2
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005524ATP bindingNASmolecular_function
GO:0005743Mitochondrial inner membraneIEAcellular_component
GO:0005829CytosolIEAcellular_component
GO:0006869Lipid transportNASbiological_process
GO:0016021Integral component of membraneNAScellular_component
GO:0016887ATPase activityIEAmolecular_function
GO:0019725Cellular homeostasisNASbiological_process
GO:0031424KeratinizationIEAbiological_process
GO:0035627Ceramide transportIEAbiological_process
GO:0043129Surfactant homeostasisIEAbiological_process
GO:0048286Lung alveolus developmentIEAbiological_process
GO:0055088Lipid homeostasisIEAbiological_process
GO:0061436Establishment of skin barrierIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.22568982180.97159784580.90702439731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.1874265140
GSE13712_SHEARUp0.0123938301
GSE13712_STATICUp0.2452393407
GSE19018Up0.0921939381
GSE19899_A1Down-0.0241766231
GSE19899_A2Up0.1985806020
PubMed_21979375_A1Down-0.1097027568
PubMed_21979375_A2Up0.0066040421
GSE35957Up0.1537142781
GSE36640Up0.1524533046
GSE54402Up0.1062105850
GSE9593Up0.0389503679
GSE43922Up0.2626608687
GSE24585Up0.1917084125
GSE37065Up0.0888104690
GSE28863_A1Down-0.0132721986
GSE28863_A2Up0.0268389073
GSE28863_A3Up0.0606103894
GSE28863_A4Up0.0038310195
GSE48662Up0.3074603504

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-335-5pMIMAT0000765MIRT017104MicroarrayFunctional MTI (Weak)18185580
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.