HCSGD entry for TRPC4AP
1. General information
| Official gene symbol | TRPC4AP |
|---|---|
| Entrez ID | 26133 |
| Gene full name | transient receptor potential cation channel, subfamily C, member 4 associated protein |
| Other gene symbols | C20orf188 TRRP4AP TRUSS |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0006511 | Ubiquitin-dependent protein catabolic process | IDA | biological_process |
| GO:0016567 | Protein ubiquitination | IDA IEA | biological_process |
| GO:0019902 | Phosphatase binding | IDA | molecular_function |
| GO:0031464 | Cul4A-RING ubiquitin ligase complex | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0190215835 | 0.9816250028 | 0.3364691275 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1640511848 |
| GSE13712_SHEAR | Down | -0.0161764331 |
| GSE13712_STATIC | Up | 0.0971134953 |
| GSE19018 | Up | 0.1801233649 |
| GSE19899_A1 | Up | 0.2248056583 |
| GSE19899_A2 | Up | 0.5701741713 |
| PubMed_21979375_A1 | Up | 1.2852389781 |
| PubMed_21979375_A2 | Up | 1.5009148915 |
| GSE35957 | Up | 0.0139608750 |
| GSE36640 | Up | 0.2237412059 |
| GSE54402 | Up | 0.2585766831 |
| GSE9593 | Up | 0.3374269229 |
| GSE43922 | Up | 0.2474689769 |
| GSE24585 | Up | 0.1942537921 |
| GSE37065 | Up | 0.0854090798 |
| GSE28863_A1 | Up | 0.3399821063 |
| GSE28863_A2 | Up | 0.1382478750 |
| GSE28863_A3 | Down | -0.7120410168 |
| GSE28863_A4 | Up | 0.1092641016 |
| GSE48662 | Up | 0.1169004102 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-320b | MIMAT0005792 | MIRT036238 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-324-5p | MIMAT0000761 | MIRT043134 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-106b-5p | MIMAT0000680 | MIRT044247 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT048897 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
