HCSGD entry for CHTOP
1. General information
| Official gene symbol | CHTOP |
|---|---|
| Entrez ID | 26097 |
| Gene full name | chromatin target of PRMT1 |
| Other gene symbols | C1orf77 FL-SRAG FOP RP1-178F15.2 SRAG SRAG-3 SRAG-5 pp7704 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000346 | Transcription export complex | IDA | cellular_component |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0006406 | MRNA export from nucleus | IDA | biological_process |
| GO:0016607 | Nuclear speck | IDA | cellular_component |
| GO:0032781 | Positive regulation of ATPase activity | IDA | biological_process |
| GO:0043231 | Intracellular membrane-bounded organelle | IDA | cellular_component |
| GO:0051096 | Positive regulation of helicase activity | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9735510049 | 0.0179957828 | 0.9999902473 | 0.2627937396 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0208910405 |
| GSE13712_SHEAR | Up | 0.0027324567 |
| GSE13712_STATIC | Down | -0.1370330171 |
| GSE19018 | Down | -0.3069590738 |
| GSE19899_A1 | Down | -0.3822984882 |
| GSE19899_A2 | Down | -0.3630227280 |
| PubMed_21979375_A1 | Down | -0.1818132523 |
| PubMed_21979375_A2 | Down | -1.3680227506 |
| GSE35957 | Down | -0.5934530404 |
| GSE36640 | Down | -0.7033275014 |
| GSE54402 | Up | 0.1260680118 |
| GSE9593 | Down | -0.6152157919 |
| GSE43922 | Up | 0.0383331854 |
| GSE24585 | Down | -0.1683726465 |
| GSE37065 | Up | 0.0535868971 |
| GSE28863_A1 | Down | -0.0674530128 |
| GSE28863_A2 | Up | 0.3212421220 |
| GSE28863_A3 | Down | -0.8218358106 |
| GSE28863_A4 | Down | -0.4538903491 |
| GSE48662 | Up | 0.1578761764 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT020760 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-296-3p | MIMAT0004679 | MIRT038414 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041594 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT045224 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-197-3p | MIMAT0000227 | MIRT048090 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049707 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
