HCSGD entry for PPP1R16B
1. General information
| Official gene symbol | PPP1R16B |
|---|---|
| Entrez ID | 26051 |
| Gene full name | protein phosphatase 1, regulatory subunit 16B |
| Other gene symbols | ANKRD4 TIMAP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005886 | Plasma membrane | IDA NAS | cellular_component |
| GO:0007165 | Signal transduction | NAS | biological_process |
| GO:0019903 | Protein phosphatase binding | NAS | molecular_function |
| GO:0051489 | Regulation of filopodium assembly | ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4762248585 | 0.6072008168 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0648022217 |
| GSE13712_SHEAR | Down | -0.5993047314 |
| GSE13712_STATIC | Down | -0.3212581712 |
| GSE19018 | Up | 0.0754570269 |
| GSE19899_A1 | Down | -0.0419176162 |
| GSE19899_A2 | Down | -0.0235792729 |
| PubMed_21979375_A1 | Down | -0.0353411691 |
| PubMed_21979375_A2 | Up | 0.1503774958 |
| GSE35957 | Up | 0.0800651819 |
| GSE36640 | Up | 0.0194169902 |
| GSE54402 | Up | 0.0000577514 |
| GSE9593 | Up | 0.0461116684 |
| GSE43922 | Up | 0.0256034057 |
| GSE24585 | Up | 0.1950157682 |
| GSE37065 | Down | -0.1545935744 |
| GSE28863_A1 | Down | -0.1332015669 |
| GSE28863_A2 | Down | -0.1635480947 |
| GSE28863_A3 | Up | 0.1891456694 |
| GSE28863_A4 | Up | 0.0632488066 |
| GSE48662 | Up | 1.5489070617 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-let-7b-5p | MIMAT0000063 | MIRT052173 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
