HCSGD entry for RPAP1
1. General information
| Official gene symbol | RPAP1 |
|---|---|
| Entrez ID | 26015 |
| Gene full name | RNA polymerase II associated protein 1 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003899 | DNA-directed RNA polymerase activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0959152426 | 0.7469485278 | 0.6481475103 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1221800089 |
| GSE13712_SHEAR | Down | -0.2395819704 |
| GSE13712_STATIC | Down | -0.0137647944 |
| GSE19018 | Up | 0.0241583759 |
| GSE19899_A1 | Up | 0.1404843984 |
| GSE19899_A2 | Up | 0.1494242790 |
| PubMed_21979375_A1 | Up | 1.4205427999 |
| PubMed_21979375_A2 | Up | 1.4451656057 |
| GSE35957 | Down | -0.3764745919 |
| GSE36640 | Down | -0.1161102022 |
| GSE54402 | Up | 0.1858054829 |
| GSE9593 | Down | -0.3894917483 |
| GSE43922 | Up | 0.4133138453 |
| GSE24585 | Down | -0.1090881616 |
| GSE37065 | Down | -0.1332232650 |
| GSE28863_A1 | Up | 0.2952652545 |
| GSE28863_A2 | Up | 0.3090370275 |
| GSE28863_A3 | Down | -0.1403439761 |
| GSE28863_A4 | Up | 0.0374408260 |
| GSE48662 | Down | -0.1644280855 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT020692 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027585 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-296-3p | MIMAT0004679 | MIRT038350 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92b-3p | MIMAT0003218 | MIRT040603 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-18a-3p | MIMAT0002891 | MIRT040756 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044763 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052223 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
