HCSGD entry for NSMF
1. General information
| Official gene symbol | NSMF |
|---|---|
| Entrez ID | 26012 |
| Gene full name | NMDA receptor synaptonuclear signaling and neuronal migration factor |
| Other gene symbols | HH9 NELF |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005635 | Nuclear envelope | ISS | cellular_component |
| GO:0005719 | Nuclear euchromatin | ISS | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0014069 | Postsynaptic density | ISS | cellular_component |
| GO:0016020 | Membrane | ISS | cellular_component |
| GO:0016363 | Nuclear matrix | ISS | cellular_component |
| GO:0030054 | Cell junction | IEA | cellular_component |
| GO:0030425 | Dendrite | ISS | cellular_component |
| GO:0030863 | Cortical cytoskeleton | ISS | cellular_component |
| GO:0031965 | Nuclear membrane | ISS | cellular_component |
| GO:0035307 | Positive regulation of protein dephosphorylation | ISS | biological_process |
| GO:0043005 | Neuron projection | ISS | cellular_component |
| GO:0043204 | Perikaryon | ISS | cellular_component |
| GO:0043523 | Regulation of neuron apoptotic process | ISS | biological_process |
| GO:0045202 | Synapse | ISS | cellular_component |
| GO:0045211 | Postsynaptic membrane | IEA | cellular_component |
| GO:0048168 | Regulation of neuronal synaptic plasticity | ISS | biological_process |
| GO:0048306 | Calcium-dependent protein binding | ISS | molecular_function |
| GO:0048814 | Regulation of dendrite morphogenesis | ISS | biological_process |
| GO:0071230 | Cellular response to amino acid stimulus | ISS | biological_process |
| GO:0071257 | Cellular response to electrical stimulus | ISS | biological_process |
| GO:0071371 | Cellular response to gonadotropin stimulus | ISS | biological_process |
| GO:0097440 | Apical dendrite | ISS | cellular_component |
| GO:2001224 | Positive regulation of neuron migration | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5944906273 | 0.7583325748 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1121181509 |
| GSE13712_SHEAR | Down | -0.1043361946 |
| GSE13712_STATIC | Up | 0.1434185378 |
| GSE19018 | Up | 0.0871217162 |
| GSE19899_A1 | Down | -0.2529833848 |
| GSE19899_A2 | Down | -0.0666601218 |
| PubMed_21979375_A1 | Up | 0.0991626796 |
| PubMed_21979375_A2 | Down | -0.2157403931 |
| GSE35957 | Down | -0.2715527903 |
| GSE36640 | Up | 0.3456626302 |
| GSE54402 | Up | 0.0909594287 |
| GSE9593 | Down | -0.0761309817 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Down | -0.0195091362 |
| GSE28863_A2 | Up | 0.1751942456 |
| GSE28863_A3 | Up | 0.0605265658 |
| GSE28863_A4 | Up | 0.2071331436 |
| GSE48662 | Up | 0.3924554226 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-324-5p | MIMAT0000761 | MIRT043137 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-222-3p | MIMAT0000279 | MIRT046715 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-129-5p | MIMAT0000242 | MIRT048045 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
