HCSGD entry for TPGS2
1. General information
| Official gene symbol | TPGS2 |
|---|---|
| Entrez ID | 25941 |
| Gene full name | tubulin polyglutamylase complex subunit 2 |
| Other gene symbols | C18orf10 L17 PGs2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005874 | Microtubule | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9534891797 | 0.0322153528 | 0.9999902473 | 0.3376902828 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2920603119 |
| GSE13712_SHEAR | Down | -0.2939656481 |
| GSE13712_STATIC | Down | -0.3419036757 |
| GSE19018 | Up | 0.3705463710 |
| GSE19899_A1 | Down | -0.6556783260 |
| GSE19899_A2 | Down | -0.3124454284 |
| PubMed_21979375_A1 | Down | -0.1882691121 |
| PubMed_21979375_A2 | Down | -0.3179680236 |
| GSE35957 | Down | -0.0249949817 |
| GSE36640 | Down | -0.5673211276 |
| GSE54402 | Down | -0.2829528350 |
| GSE9593 | Up | 0.3768071334 |
| GSE43922 | Down | -0.5467401755 |
| GSE24585 | Down | -0.0451085544 |
| GSE37065 | Up | 0.0026087494 |
| GSE28863_A1 | Up | 0.1120081653 |
| GSE28863_A2 | Down | -0.2198130765 |
| GSE28863_A3 | Down | -0.3551342497 |
| GSE28863_A4 | Up | 0.0788833513 |
| GSE48662 | Down | -0.1080225919 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-148b-3p | MIMAT0000759 | MIRT019452 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-7-5p | MIMAT0000252 | MIRT025881 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-7-5p | MIMAT0000252 | MIRT025881 | Microarray | Functional MTI (Weak) | 19073608 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026690 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-423-5p | MIMAT0004748 | MIRT038092 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-26a-5p | MIMAT0000082 | MIRT050148 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-19b-3p | MIMAT0000074 | MIRT050628 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
