HCSGD entry for GEMIN5
1. General information
| Official gene symbol | GEMIN5 |
|---|---|
| Entrez ID | 25929 |
| Gene full name | gem (nuclear organelle) associated protein 5 |
| Other gene symbols | GEMIN-5 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000387 | Spliceosomal snRNP assembly | IDA TAS | biological_process |
| GO:0000398 | MRNA splicing, via spliceosome | TAS | biological_process |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005654 | Nucleoplasm | IDA TAS | cellular_component |
| GO:0005681 | Spliceosomal complex | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005829 | Cytosol | IDA TAS | cellular_component |
| GO:0006461 | Protein complex assembly | TAS | biological_process |
| GO:0010467 | Gene expression | TAS | biological_process |
| GO:0016070 | RNA metabolic process | TAS | biological_process |
| GO:0016604 | Nuclear body | IDA | cellular_component |
| GO:0017069 | SnRNA binding | IDA | molecular_function |
| GO:0032797 | SMN complex | IDA | cellular_component |
| GO:0034660 | NcRNA metabolic process | TAS | biological_process |
| GO:0034719 | SMN-Sm protein complex | IDA | cellular_component |
| GO:0097504 | Gemini of coiled bodies | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0607967820 | 0.1475237149 | 0.5338042014 | 0.7425839931 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2599620812 |
| GSE13712_SHEAR | Up | 0.1900006412 |
| GSE13712_STATIC | Up | 0.4188195333 |
| GSE19018 | Down | -1.0710757038 |
| GSE19899_A1 | Down | -0.0208212229 |
| GSE19899_A2 | Up | 0.6020353117 |
| PubMed_21979375_A1 | Up | 1.4174253565 |
| PubMed_21979375_A2 | Up | 1.3160508354 |
| GSE35957 | Down | -0.7455626594 |
| GSE36640 | Down | -0.6526306382 |
| GSE54402 | Up | 0.3787200022 |
| GSE9593 | Down | -0.2447327816 |
| GSE43922 | Up | 0.3109966575 |
| GSE24585 | Down | -0.6109670495 |
| GSE37065 | Down | -0.0680336584 |
| GSE28863_A1 | Up | 0.3369027158 |
| GSE28863_A2 | Up | 0.2154258153 |
| GSE28863_A3 | Down | -0.4464579475 |
| GSE28863_A4 | Down | -0.3575514223 |
| GSE48662 | Up | 0.2243857347 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT020655 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025417 | Proteomics | Functional MTI (Weak) | 21566225 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031602 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT032254 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-1303 | MIMAT0005891 | MIRT035885 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT036905 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-324-5p | MIMAT0000761 | MIRT043250 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-10a-5p | MIMAT0000253 | MIRT047681 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
