HCSGD entry for RTTN
1. General information
| Official gene symbol | RTTN |
|---|---|
| Entrez ID | 25914 |
| Gene full name | rotatin |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0007368 | Determination of left/right symmetry | IEA | biological_process |
| GO:0036064 | Ciliary basal body | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0737696820 | 0.8454666654 | 0.5771018419 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0791155857 |
| GSE13712_SHEAR | Up | 0.1833918505 |
| GSE13712_STATIC | Up | 0.2278191795 |
| GSE19018 | Up | 0.1784465403 |
| GSE19899_A1 | Up | 0.2266416602 |
| GSE19899_A2 | Up | 0.0316555656 |
| PubMed_21979375_A1 | Up | 1.1254042181 |
| PubMed_21979375_A2 | Up | 0.7816886081 |
| GSE35957 | Down | -0.0949394973 |
| GSE36640 | Down | -0.4357955527 |
| GSE54402 | Up | 0.5299555128 |
| GSE9593 | Down | -0.1999094414 |
| GSE43922 | Up | 0.0319606149 |
| GSE24585 | Down | -0.2066037904 |
| GSE37065 | Up | 0.4277051253 |
| GSE28863_A1 | Up | 0.1235440793 |
| GSE28863_A2 | Up | 0.4271604824 |
| GSE28863_A3 | Down | -0.4400228908 |
| GSE28863_A4 | Up | 0.1154253577 |
| GSE48662 | Down | -0.2436595599 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-17-5p | MIMAT0000070 | MIRT050821 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
