HCSGD entry for POT1


1. General information

Official gene symbolPOT1
Entrez ID25913
Gene full nameprotection of telomeres 1
Other gene symbolsHPOT1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000723Telomere maintenanceIEA TASbiological_process
GO:0000781Chromosome, telomeric regionIDAcellular_component
GO:0000783Nuclear telomere cap complexIDAcellular_component
GO:0000784Nuclear chromosome, telomeric regionIEAcellular_component
GO:0005515Protein bindingIPImolecular_function
GO:0005654NucleoplasmTAScellular_component
GO:0007004Telomere maintenance via telomeraseIDAbiological_process
GO:0010521Telomerase inhibitor activityIDAmolecular_function
GO:0016233Telomere cappingIGI IMPbiological_process
GO:0017151DEAD/H-box RNA helicase bindingIPImolecular_function
GO:0032203Telomere formation via telomeraseIDAbiological_process
GO:0032211Negative regulation of telomere maintenance via telomeraseIMPbiological_process
GO:0032212Positive regulation of telomere maintenance via telomeraseIMPbiological_process
GO:0032508DNA duplex unwindingIDAbiological_process
GO:0043047Single-stranded telomeric DNA bindingIDA IEA IMPmolecular_function
GO:0051096Positive regulation of helicase activityIDAbiological_process
GO:0051973Positive regulation of telomerase activityIDAbiological_process
GO:0051974Negative regulation of telomerase activityIDAbiological_process
GO:0060383Positive regulation of DNA strand elongationIDAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.77179434670.00589200640.99999024730.1551324351

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0458165260
GSE13712_SHEARDown-0.2941117915
GSE13712_STATICDown-0.3050969347
GSE19018Up0.1275300619
GSE19899_A1Down-0.6983512524
GSE19899_A2Down-1.9493347295
PubMed_21979375_A1Up0.0253355508
PubMed_21979375_A2Down-1.5997370631
GSE35957Down-0.7098517676
GSE36640Down-1.2138639517
GSE54402Down-0.2473408502
GSE9593Down-0.4532745259
GSE43922Down-0.5780029553
GSE24585Up0.0938670538
GSE37065Up0.1077627954
GSE28863_A1Up0.1082274146
GSE28863_A2Up0.5871549339
GSE28863_A3Down-0.9687554064
GSE28863_A4Down-0.2771358643
GSE48662Up1.7669054160

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: 8 abstracts the gene occurs.


PubMed ID of the article

Sentenece the gene occurs

26462146Ber8 could then induce the delocalization of TRF1 and POT1 from the telomere accompanied by a rapid telomere uncapping
26345860Based on the established cell replicative senescence model, reverse transcription-polymerase chain reaction and western blot analyses were used to detect telomere-associated factor expression at the mRNA and protein levels, including that of human telomere binding protein 1, tankyrase 1, telomerase RNA, telomere protection protein 1 (POT1), and p53 during the process of human embryonic lung fibroblast replicative senescence
26345860The results showed that transcription of human telomere binding protein 1 did not change with cell senescence, whereas the protein expression of human telomere binding protein 1 increased gradually and then decreased rapidly; there was no change in the mRNA and protein expression of POT1; with the replicative senescence of human embryonic lung fibroblasts, expression of POT1 decreased gradually; TRF1 showed an increasing trend with cell senescence; and p53 protein expression did not change
26345860Together, the results from this study suggest that human telomere binding protein 1, POT1, and TRF1 played important roles in cell senescence
23514618Gene array qPCR analysis of MIA PaCa-2 cells treated with the lead compound revealed significant dose-dependent modulation of a distinct subset of genes, including strong induction of DNA damage responsive genes CDKN1A, DDIT3, GADD45A/G, and PPM1D, and repression of genes involved in telomere maintenance, including hPOT1 and PARP1
19067655We have tested this hypothesis in a cohort of preimplantation human renal allograft biopsies ( n = 75) that have been assayed by real-time polymerase chain reaction for the expression of known markers of cellular damage and biological aging, including CDKN2A, CDKN1A, SIRT2 and POT1
19067655POT1 expression also showed a significant association with this parameter ( p = 0
18778766Together, our results show that short G-rich single-stranded oligonucleotides induce telomere uncapping in a cell cycle-dependent manner, probably by titrating essential factors like Pot1 away from telomeres
18089797Functional diversity of human protection of telomeres 1 isoforms in telomere protection and cellular senescence
18089797Protection of telomeres 1 (POT1) proteins in various organisms bind telomeres and regulate their structure and function
18089797In contrast to mice carrying two distinct POT1 genes encoding two POT1 proteins (POT1a and POT1b), humans have the single POT1 gene
18089797In addition to full-length POT1 protein (variant v1), the human POT1 gene encodes four other variants due to alternative RNA splicing (variants v2, v3, v4, and v5), whose functions are poorly understood
18089797The functional analyses of the NH(2)-terminally and COOH-terminally truncated POT1 variants in this study showed that neither the single-stranded telomere-binding ability of the NH(2)-terminal oligonucleotide-binding (OB) folds nor the telomerase-dependent telomere elongation activity mediated by the COOH-terminal TPP1-interacting domain was telomere protective by itself
18089797This study highlights a human-specific complexity in telomere protection and damage signaling conferred by functionally distinct isoforms from the single POT1 gene
17284852To understand the telomere regulation mechanism in relation to cell aging and cancer, we examined the single-stranded telomeric DNA binding domain (ssDBD) of fission yeast telomere-binding protein Pot1 by constructing a series of deletion mutants
15000677Chromosome telomeres of humans and many model organisms contain a structure called a t-loop, which is maintained by TERF, TINF2, Pot1, and other proteins
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