HCSGD entry for AHCTF1
1. General information
| Official gene symbol | AHCTF1 |
|---|---|
| Entrez ID | 25909 |
| Gene full name | AT hook containing transcription factor 1 |
| Other gene symbols | ELYS MST108 TMBS62 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000278 | Mitotic cell cycle | TAS | biological_process |
| GO:0000777 | Condensed chromosome kinetochore | IDA | cellular_component |
| GO:0000785 | Chromatin | IDA | cellular_component |
| GO:0000910 | Cytokinesis | IMP | biological_process |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005643 | Nuclear pore | IDA | cellular_component |
| GO:0005654 | Nucleoplasm | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0016363 | Nuclear matrix | IEA | cellular_component |
| GO:0031080 | Nuclear pore outer ring | IDA | cellular_component |
| GO:0031965 | Nuclear membrane | IDA | cellular_component |
| GO:0051028 | MRNA transport | IEA | biological_process |
| GO:0051292 | Nuclear pore complex assembly | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3046012234 | 0.5384723605 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0514228123 |
| GSE13712_SHEAR | Up | 0.2321000104 |
| GSE13712_STATIC | Up | 0.1421108527 |
| GSE19018 | Down | -0.4677988402 |
| GSE19899_A1 | Up | 0.3897798593 |
| GSE19899_A2 | Up | 0.3790461859 |
| PubMed_21979375_A1 | Up | 0.5342244919 |
| PubMed_21979375_A2 | Up | 0.5134283554 |
| GSE35957 | Down | -0.3433145345 |
| GSE36640 | Down | -0.6504729106 |
| GSE54402 | Up | 0.3464407636 |
| GSE9593 | Down | -0.3271619812 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Down | -0.1123264903 |
| GSE28863_A2 | Up | 0.1257395004 |
| GSE28863_A3 | Up | 0.0328176854 |
| GSE28863_A4 | Up | 0.1684576964 |
| GSE48662 | Down | -0.2056525685 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-let-7b-5p | MIMAT0000063 | MIRT032376 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT045210 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
