HCSGD entry for CCDC28A
1. General information
| Official gene symbol | CCDC28A |
|---|---|
| Entrez ID | 25901 |
| Gene full name | coiled-coil domain containing 28A |
| Other gene symbols | C6orf80 CCRL1AP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
Not in the Gene ontology4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2076586756 | 0.2612123893 | 0.8787434084 | 0.9807947646 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3176452584 |
| GSE13712_SHEAR | Down | -0.4773174873 |
| GSE13712_STATIC | Down | -0.4246027209 |
| GSE19018 | Up | 0.5281561146 |
| GSE19899_A1 | Up | 0.2376731914 |
| GSE19899_A2 | Down | -0.1904344944 |
| PubMed_21979375_A1 | Up | 0.3884326070 |
| PubMed_21979375_A2 | Up | 0.0529690125 |
| GSE35957 | Down | -0.2029962646 |
| GSE36640 | Down | -0.3942703458 |
| GSE54402 | Up | 0.2790395894 |
| GSE9593 | Up | 0.0597327549 |
| GSE43922 | Up | 0.0535893699 |
| GSE24585 | Up | 0.0869310614 |
| GSE37065 | Up | 0.1988035070 |
| GSE28863_A1 | Up | 0.1533192781 |
| GSE28863_A2 | Down | -0.1910561647 |
| GSE28863_A3 | Down | -0.8274064025 |
| GSE28863_A4 | Down | -0.1293893016 |
| GSE48662 | Up | 0.3037279437 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016608 | Microarray | Functional MTI (Weak) | 20304954 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022982 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT030003 | Microarray | Functional MTI (Weak) | 19088304 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
