HCSGD entry for TRIM58
1. General information
| Official gene symbol | TRIM58 |
|---|---|
| Entrez ID | 25893 |
| Gene full name | tripartite motif containing 58 |
| Other gene symbols | BIA2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5161685042 | 0.1686253068 | 0.9999902473 | 0.7941759528 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.4408031599 |
| GSE13712_SHEAR | Down | -0.4895598029 |
| GSE13712_STATIC | Down | -0.2357345672 |
| GSE19018 | Up | 0.0463207662 |
| GSE19899_A1 | Down | -0.1154153511 |
| GSE19899_A2 | Down | -0.5007273349 |
| PubMed_21979375_A1 | Down | -0.3865485799 |
| PubMed_21979375_A2 | Down | -0.1320906024 |
| GSE35957 | Up | 0.2733022474 |
| GSE36640 | Up | 2.9549329573 |
| GSE54402 | Down | -0.1297915489 |
| GSE9593 | Down | -0.0250557522 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Down | -0.2161549088 |
| GSE28863_A2 | Up | 0.0289687431 |
| GSE28863_A3 | Up | 0.3676199136 |
| GSE28863_A4 | Up | 0.1167687083 |
| GSE48662 | Down | -0.1405326811 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029012 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
