HCSGD entry for GALK2
1. General information
| Official gene symbol | GALK2 |
|---|---|
| Entrez ID | 2585 |
| Gene full name | galactokinase 2 |
| Other gene symbols | GK2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004335 | Galactokinase activity | IDA IEA | molecular_function |
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | TAS | biological_process |
| GO:0006012 | Galactose metabolic process | IEA | biological_process |
| GO:0016301 | Kinase activity | IEA | molecular_function |
| GO:0016773 | Phosphotransferase activity, alcohol group as acceptor | IEA | molecular_function |
| GO:0033858 | N-acetylgalactosamine kinase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5229004901 | 0.1651550207 | 0.9999902473 | 0.7865092981 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2018315682 |
| GSE13712_SHEAR | Up | 0.1643549052 |
| GSE13712_STATIC | Up | 0.2464520218 |
| GSE19018 | Up | 0.0574762311 |
| GSE19899_A1 | Down | -0.0006839783 |
| GSE19899_A2 | Down | -0.8389339595 |
| PubMed_21979375_A1 | Down | -0.0866874169 |
| PubMed_21979375_A2 | Down | -1.0468000471 |
| GSE35957 | Down | -0.5156714593 |
| GSE36640 | Down | -0.6491519484 |
| GSE54402 | Down | -0.1794368558 |
| GSE9593 | Down | -0.7020182692 |
| GSE43922 | Up | 0.0504562320 |
| GSE24585 | Down | -0.0982821621 |
| GSE37065 | Up | 0.2873427587 |
| GSE28863_A1 | Up | 0.2367143260 |
| GSE28863_A2 | Up | 0.2690900442 |
| GSE28863_A3 | Down | -0.2100774291 |
| GSE28863_A4 | Up | 0.0543852840 |
| GSE48662 | Up | 0.2489002832 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-148a-5p | MIMAT0004549 | MIRT038704 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
