HCSGD entry for SAMM50
1. General information
| Official gene symbol | SAMM50 |
|---|---|
| Entrez ID | 25813 |
| Gene full name | sorting and assembly machinery component 50 homolog (S. cerevisiae) |
| Other gene symbols | OMP85 SAM50 TOB55 TRG-3 YNL026W |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001401 | Mitochondrial sorting and assembly machinery complex | IMP | cellular_component |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005739 | Mitochondrion | IDA | cellular_component |
| GO:0005741 | Mitochondrial outer membrane | IDA | cellular_component |
| GO:0005743 | Mitochondrial inner membrane | IEA | cellular_component |
| GO:0006626 | Protein targeting to mitochondrion | TAS | biological_process |
| GO:0016021 | Integral component of membrane | IDA | cellular_component |
| GO:0019867 | Outer membrane | IEA | cellular_component |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
| GO:0045040 | Protein import into mitochondrial outer membrane | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5773548231 | 0.7045250218 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3492426763 |
| GSE13712_SHEAR | Down | -0.0786893119 |
| GSE13712_STATIC | Down | -0.0029699087 |
| GSE19018 | Down | -0.0397979275 |
| GSE19899_A1 | Up | 0.0962402404 |
| GSE19899_A2 | Up | 0.1605550860 |
| PubMed_21979375_A1 | Up | 0.4139032597 |
| PubMed_21979375_A2 | Up | 0.2241614840 |
| GSE35957 | Down | -0.1174339067 |
| GSE36640 | Down | -0.1058310536 |
| GSE54402 | Up | 0.1414860989 |
| GSE9593 | Down | -0.0515197124 |
| GSE43922 | Up | 0.1588940948 |
| GSE24585 | Down | -0.0612680170 |
| GSE37065 | Down | -0.1611567193 |
| GSE28863_A1 | Down | -0.0806873827 |
| GSE28863_A2 | Down | -0.1101249141 |
| GSE28863_A3 | Down | -0.5740757368 |
| GSE28863_A4 | Up | 0.1435081035 |
| GSE48662 | Down | -0.1552531707 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
