HCSGD entry for GCA


1. General information

Official gene symbolGCA
Entrez ID25801
Gene full namegrancalcin, EF-hand calcium binding protein
Other gene symbolsGCL
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005509Calcium ion bindingIDA IEAmolecular_function
GO:0005737CytoplasmIDAcellular_component
GO:0005886Plasma membraneIDAcellular_component
GO:0042803Protein homodimerization activityIPImolecular_function
GO:0046982Protein heterodimerization activityIPImolecular_function
GO:0061025Membrane fusionTASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.07459511420.00926507730.57937672570.1897790661

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.8267450094
GSE13712_SHEARUp0.9368178580
GSE13712_STATICUp1.1203161448
GSE19018Down-0.5718086377
GSE19899_A1Down-0.3127326735
GSE19899_A2Down-1.3877201900
PubMed_21979375_A1Down-0.8443022059
PubMed_21979375_A2Down-1.1906418362
GSE35957Down-0.5857689279
GSE36640Up0.9835414160
GSE54402Down-1.2071597736
GSE9593Down-0.6140651120
GSE43922Down-0.1818467833
GSE24585Up2.7248631885
GSE37065Up0.6057309611
GSE28863_A1Down-0.1608722326
GSE28863_A2Up0.9909257230
GSE28863_A3Up0.0221185618
GSE28863_A4Down-0.0676854713
GSE48662Down-0.4051038935

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-124-3pMIMAT0000422MIRT004894MicroarrayFunctional MTI (Weak)15685193
hsa-miR-193b-3pMIMAT0002819MIRT041484CLASHFunctional MTI (Weak)23622248
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  • mirRecord

MicroRNA name

mirBase ID

Target site number

MiRNA mature ID

Test method inter

MiRNA regulation site

Reporter target site

Pubmed ID

hsa-miR-27a-3pMIMAT0000084NAhsa-miR-27a19440384
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6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.