HCSGD entry for STXBP4
1. General information
| Official gene symbol | STXBP4 |
|---|---|
| Entrez ID | 252983 |
| Gene full name | syntaxin binding protein 4 |
| Other gene symbols | Synip |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0006605 | Protein targeting | IEA | biological_process |
| GO:0008286 | Insulin receptor signaling pathway | IEA | biological_process |
| GO:0015758 | Glucose transport | IEA | biological_process |
| GO:0045111 | Intermediate filament cytoskeleton | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1618514646 | 0.5178305687 | 0.7962789533 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0010408273 |
| GSE13712_SHEAR | Up | 0.2110968137 |
| GSE13712_STATIC | Up | 0.6828005668 |
| GSE19018 | Down | -0.3439645350 |
| GSE19899_A1 | Up | 0.1370262087 |
| GSE19899_A2 | Down | -0.0882749730 |
| PubMed_21979375_A1 | Down | -0.2024321813 |
| PubMed_21979375_A2 | Up | 0.1505655817 |
| GSE35957 | Down | -0.1167283677 |
| GSE36640 | Down | -0.3327457817 |
| GSE54402 | Up | 0.2629852278 |
| GSE9593 | Down | -0.0164005965 |
| GSE43922 | Up | 0.0678308546 |
| GSE24585 | Up | 0.5328119367 |
| GSE37065 | Up | 0.3255711031 |
| GSE28863_A1 | Up | 0.1300406796 |
| GSE28863_A2 | Down | -0.1319544204 |
| GSE28863_A3 | Down | -0.8664097849 |
| GSE28863_A4 | Up | 0.1480322169 |
| GSE48662 | Up | 0.0073515121 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-192-5p | MIMAT0000222 | MIRT026794 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-324-5p | MIMAT0000761 | MIRT043123 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
