HCSGD entry for FTSJ1
1. General information
| Official gene symbol | FTSJ1 |
|---|---|
| Entrez ID | 24140 |
| Gene full name | FtsJ RNA methyltransferase homolog 1 (E. coli) |
| Other gene symbols | CDLIV MRX44 MRX9 SPB1 TRM7 TRMT7 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001510 | RNA methylation | IEA | biological_process |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0008168 | Methyltransferase activity | IEA | molecular_function |
| GO:0008175 | TRNA methyltransferase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9698305498 | 0.0216578018 | 0.9999902473 | 0.2837565455 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1326556466 |
| GSE13712_SHEAR | Down | -0.1275543255 |
| GSE13712_STATIC | Up | 0.1751214551 |
| GSE19018 | Down | -0.1796588198 |
| GSE19899_A1 | Down | -0.2527126636 |
| GSE19899_A2 | Down | -0.3340385172 |
| PubMed_21979375_A1 | Down | -0.1215166541 |
| PubMed_21979375_A2 | Down | -0.2696908303 |
| GSE35957 | Down | -0.6749312310 |
| GSE36640 | Down | -0.3510055536 |
| GSE54402 | Up | 0.3640089338 |
| GSE9593 | Down | -0.2412951720 |
| GSE43922 | Down | -0.0746167361 |
| GSE24585 | Down | -0.3191594858 |
| GSE37065 | Down | -0.2652902380 |
| GSE28863_A1 | Down | -0.2371383431 |
| GSE28863_A2 | Up | 0.0409533743 |
| GSE28863_A3 | Down | -0.5515572081 |
| GSE28863_A4 | Up | 0.1370795980 |
| GSE48662 | Down | -0.8091787722 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022963 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-1 | MIMAT0000416 | MIRT023951 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-30c-1-3p | MIMAT0004674 | MIRT038539 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049665 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
