HCSGD entry for BRD1
1. General information
| Official gene symbol | BRD1 |
|---|---|
| Entrez ID | 23774 |
| Gene full name | bromodomain containing 1 |
| Other gene symbols | BRL BRPF1 BRPF2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IDA TAS | cellular_component |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0042393 | Histone binding | IDA | molecular_function |
| GO:0043966 | Histone H3 acetylation | IDA | biological_process |
| GO:0070776 | MOZ/MORF histone acetyltransferase complex | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5962715588 | 0.1245716196 | 0.9999902473 | 0.6776647448 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3284031193 |
| GSE13712_SHEAR | Up | 0.3868281641 |
| GSE13712_STATIC | Up | 0.0363737405 |
| GSE19018 | Down | -0.0678590770 |
| GSE19899_A1 | Down | -0.0880232164 |
| GSE19899_A2 | Down | -0.1084216500 |
| PubMed_21979375_A1 | Down | -0.5846182939 |
| PubMed_21979375_A2 | Down | -0.0815500220 |
| GSE35957 | Down | -0.0169841899 |
| GSE36640 | Down | -0.2903166460 |
| GSE54402 | Down | -0.0254808847 |
| GSE9593 | Down | -0.2644178397 |
| GSE43922 | Up | 0.2535223943 |
| GSE24585 | Up | 0.6615446749 |
| GSE37065 | Up | 0.1512920600 |
| GSE28863_A1 | Down | -0.2872911994 |
| GSE28863_A2 | Down | -0.1824342283 |
| GSE28863_A3 | Down | -0.1942883926 |
| GSE28863_A4 | Down | -0.2264499899 |
| GSE48662 | Up | 0.2493135327 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-186-5p | MIMAT0000456 | MIRT021155 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-221-3p | MIMAT0000278 | MIRT024192 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-18a-3p | MIMAT0002891 | MIRT040831 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-497-5p | MIMAT0002820 | MIRT041191 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7g-5p | MIMAT0000414 | MIRT046561 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
