HCSGD entry for PITPNB
1. General information
| Official gene symbol | PITPNB |
|---|---|
| Entrez ID | 23760 |
| Gene full name | phosphatidylinositol transfer protein, beta |
| Other gene symbols | PI-TP-beta PtdInsTP VIB1B |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0001701 | In utero embryonic development | IEA | biological_process |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0005789 | Endoplasmic reticulum membrane | TAS | cellular_component |
| GO:0006629 | Lipid metabolic process | NAS | biological_process |
| GO:0006644 | Phospholipid metabolic process | TAS | biological_process |
| GO:0006810 | Transport | IEA | biological_process |
| GO:0008289 | Lipid binding | IEA | molecular_function |
| GO:0015914 | Phospholipid transport | TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0046474 | Glycerophospholipid biosynthetic process | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7233102656 | 0.1588939136 | 0.9999902473 | 0.7700200920 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1436785767 |
| GSE13712_SHEAR | Up | 0.0706497254 |
| GSE13712_STATIC | Up | 0.0126574601 |
| GSE19018 | Down | -0.6500291987 |
| GSE19899_A1 | Down | -0.3735794468 |
| GSE19899_A2 | Up | 0.0370779176 |
| PubMed_21979375_A1 | Up | 0.0825174505 |
| PubMed_21979375_A2 | Up | 0.2356409529 |
| GSE35957 | Down | -0.5568812481 |
| GSE36640 | Down | -0.5342127662 |
| GSE54402 | Down | -0.0118485872 |
| GSE9593 | Down | -0.0457402660 |
| GSE43922 | Down | -0.0292641827 |
| GSE24585 | Up | 0.0477243057 |
| GSE37065 | Down | -0.0430611720 |
| GSE28863_A1 | Up | 0.4672445094 |
| GSE28863_A2 | Up | 0.0027620419 |
| GSE28863_A3 | Up | 0.4084032195 |
| GSE28863_A4 | Up | 0.2286220542 |
| GSE48662 | Down | -0.4281751137 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016434 | Microarray | Functional MTI (Weak) | 20304954 |
| hsa-miR-140-3p | MIMAT0004597 | MIRT021667 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024573 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-181a-5p | MIMAT0000256 | MIRT025104 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026369 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-1229-3p | MIMAT0005584 | MIRT036378 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-30c-2-3p | MIMAT0004550 | MIRT038698 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
