HCSGD entry for AMACR
1. General information
| Official gene symbol | AMACR |
|---|---|
| Entrez ID | 23600 |
| Gene full name | alpha-methylacyl-CoA racemase |
| Other gene symbols | AMACRD CBAS4 RACE RM |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003824 | Catalytic activity | IEA | molecular_function |
| GO:0005102 | Receptor binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005739 | Mitochondrion | IDA | cellular_component |
| GO:0005777 | Peroxisome | IDA | cellular_component |
| GO:0005782 | Peroxisomal matrix | TAS | cellular_component |
| GO:0006699 | Bile acid biosynthetic process | IEA TAS | biological_process |
| GO:0008111 | Alpha-methylacyl-CoA racemase activity | IDA IMP | molecular_function |
| GO:0008206 | Bile acid metabolic process | IDA TAS | biological_process |
| GO:0033540 | Fatty acid beta-oxidation using acyl-CoA oxidase | TAS | biological_process |
| GO:0044255 | Cellular lipid metabolic process | TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9303125641 | 0.3691789066 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0511199862 |
| GSE13712_SHEAR | Up | 0.0771505079 |
| GSE13712_STATIC | Down | -0.1138968929 |
| GSE19018 | Up | 0.0144917966 |
| GSE19899_A1 | Up | 0.1079751526 |
| GSE19899_A2 | Up | 0.1490084641 |
| PubMed_21979375_A1 | Down | -0.1594846786 |
| PubMed_21979375_A2 | Down | -0.1368686818 |
| GSE35957 | Up | 0.1034587922 |
| GSE36640 | Up | 0.0973993535 |
| GSE54402 | Up | 0.0013217347 |
| GSE9593 | Down | -0.0122928840 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Down | -0.2622778488 |
| GSE28863_A2 | Up | 0.1903827951 |
| GSE28863_A3 | Down | -0.5741856251 |
| GSE28863_A4 | Down | -0.2262048546 |
| GSE48662 | Down | -0.1071465747 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041573 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
