HCSGD entry for TMEM50A
1. General information
| Official gene symbol | TMEM50A |
|---|---|
| Entrez ID | 23585 |
| Gene full name | transmembrane protein 50A |
| Other gene symbols | IFNRC SMP1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005783 | Endoplasmic reticulum | IDA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0218250598 | 0.8173756544 | 0.3550546125 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3777601940 |
| GSE13712_SHEAR | Up | 0.2832419102 |
| GSE13712_STATIC | Up | 0.2189014706 |
| GSE19018 | Up | 0.5284227172 |
| GSE19899_A1 | Up | 0.3666180382 |
| GSE19899_A2 | Up | 0.6257023260 |
| PubMed_21979375_A1 | Up | 0.4108463833 |
| PubMed_21979375_A2 | Up | 0.4910128443 |
| GSE35957 | Up | 0.0643562719 |
| GSE36640 | Up | 0.8520878917 |
| GSE54402 | Up | 0.1931488004 |
| GSE9593 | Up | 0.4880256543 |
| GSE43922 | Up | 0.2439441502 |
| GSE24585 | Up | 0.2419416748 |
| GSE37065 | Up | 0.1047622024 |
| GSE28863_A1 | Down | -0.1593660500 |
| GSE28863_A2 | Down | -0.3204112837 |
| GSE28863_A3 | Down | -0.9498636619 |
| GSE28863_A4 | Down | -0.2057060062 |
| GSE48662 | Down | -0.1836404079 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT030331 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-484 | MIMAT0002174 | MIRT041778 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-149-5p | MIMAT0000450 | MIRT045670 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
