HCSGD entry for ADAT1
1. General information
| Official gene symbol | ADAT1 |
|---|---|
| Entrez ID | 23536 |
| Gene full name | adenosine deaminase, tRNA-specific 1 |
| Other gene symbols | HADAT1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003723 | RNA binding | IEA IMP | molecular_function |
| GO:0004000 | Adenosine deaminase activity | IEA | molecular_function |
| GO:0006396 | RNA processing | IEA | biological_process |
| GO:0008033 | TRNA processing | IMP | biological_process |
| GO:0008251 | TRNA-specific adenosine deaminase activity | IMP | molecular_function |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1618267353 | 0.6055446298 | 0.7962789533 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.4477569925 |
| GSE13712_SHEAR | Up | 0.3271829113 |
| GSE13712_STATIC | Down | -0.0196822808 |
| GSE19018 | Down | -0.5490797415 |
| GSE19899_A1 | Up | 0.0597582206 |
| GSE19899_A2 | Up | 0.1797876385 |
| PubMed_21979375_A1 | Up | 0.2230059559 |
| PubMed_21979375_A2 | Up | 0.8357213352 |
| GSE35957 | Down | -0.5548031772 |
| GSE36640 | Up | 0.0564508496 |
| GSE54402 | Up | 0.4149310411 |
| GSE9593 | Down | -0.0158646591 |
| GSE43922 | Up | 0.1403614649 |
| GSE24585 | Up | 0.1421452658 |
| GSE37065 | Up | 0.1011428576 |
| GSE28863_A1 | Down | -0.2820726033 |
| GSE28863_A2 | Up | 0.0008978281 |
| GSE28863_A3 | Down | -0.4076217003 |
| GSE28863_A4 | Up | 0.1226131099 |
| GSE48662 | Down | -0.0887034497 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-92b-3p | MIMAT0003218 | MIRT040601 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
