HCSGD entry for TGDS
1. General information
| Official gene symbol | TGDS |
|---|---|
| Entrez ID | 23483 |
| Gene full name | TDP-glucose 4,6-dehydratase |
| Other gene symbols | SDR2E1 TDPGD |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0008460 | DTDP-glucose 4,6-dehydratase activity | IEA | molecular_function |
| GO:0009225 | Nucleotide-sugar metabolic process | IEA | biological_process |
| GO:0050662 | Coenzyme binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4242300293 | 0.4912904601 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0920209646 |
| GSE13712_SHEAR | Up | 0.6098124542 |
| GSE13712_STATIC | Up | 0.4284021499 |
| GSE19018 | Down | -0.1361344445 |
| GSE19899_A1 | Up | 0.0282186521 |
| GSE19899_A2 | Up | 0.0391923355 |
| PubMed_21979375_A1 | Up | 0.7058620174 |
| PubMed_21979375_A2 | Down | -0.1774281570 |
| GSE35957 | Down | -0.3727502044 |
| GSE36640 | Up | 0.3239999883 |
| GSE54402 | Down | -0.0770815092 |
| GSE9593 | Down | -0.1789290925 |
| GSE43922 | Up | 0.0924446253 |
| GSE24585 | Down | -0.0256263564 |
| GSE37065 | Up | 0.0844099173 |
| GSE28863_A1 | Up | 0.0399391973 |
| GSE28863_A2 | Down | -0.0437969981 |
| GSE28863_A3 | Down | -0.3377505275 |
| GSE28863_A4 | Up | 0.0459241693 |
| GSE48662 | Down | -0.5411558181 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT023189 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
