HCSGD entry for SEC61G

1. General information

Official gene symbolSEC61G
Entrez ID23480
Gene full nameSec61 gamma subunit
Other gene symbolsSSS1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0002474Antigen processing and presentation of peptide antigen via MHC class ITASbiological_process
GO:0002479Antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependentTASbiological_process
GO:0005789Endoplasmic reticulum membraneIEAcellular_component
GO:0006412TranslationTASbiological_process
GO:0006614SRP-dependent cotranslational protein targeting to membraneTASbiological_process
GO:0008565Protein transporter activityISSmolecular_function
GO:0010467Gene expressionTASbiological_process
GO:0015450P-P-bond-hydrolysis-driven protein transmembrane transporter activityIEAmolecular_function
GO:0016020MembraneIDAcellular_component
GO:0016021Integral component of membraneIEAcellular_component
GO:0042590Antigen processing and presentation of exogenous peptide antigen via MHC class ITASbiological_process
GO:0044267Cellular protein metabolic processTASbiological_process
GO:0045047Protein targeting to ERISSbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.41640797080.32372705060.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.2392625457
GSE13712_SHEARUp0.1257326205
GSE13712_STATICUp0.1308722601
GSE19018Up0.5452972060
GSE19899_A1Up0.3431586639
GSE19899_A2Down-0.1674076138
PubMed_21979375_A1Up0.0865263944
PubMed_21979375_A2Up0.2257988223
GSE35957Down-0.4684196903
GSE36640Down-0.1627174422
GSE54402Up0.2525666974
GSE9593Down-0.1890026994
GSE43922Up0.1248048418
GSE24585Down-0.3426866083
GSE37065Down-0.2593031681
GSE28863_A1Up0.0651206401
GSE28863_A2Up0.1693034906
GSE28863_A3Down-0.2619145322
GSE28863_A4Down-0.1335290041
GSE48662Down-0.1817777762

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-26b-5pMIMAT0000083MIRT028829MicroarrayFunctional MTI (Weak)19088304
hsa-miR-1260bMIMAT0015041MIRT052780CLASHFunctional MTI (Weak)23622248
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.