HCSGD entry for CAPN7
1. General information
| Official gene symbol | CAPN7 |
|---|---|
| Entrez ID | 23473 |
| Gene full name | calpain 7 |
| Other gene symbols | CALPAIN7 PALBH |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004198 | Calcium-dependent cysteine-type endopeptidase activity | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006508 | Proteolysis | IEA | biological_process |
| GO:0090541 | MIT domain binding | IPI | molecular_function |
| GO:0097264 | Self proteolysis | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7862943809 | 0.1322028950 | 0.9999902473 | 0.7009184693 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2979496406 |
| GSE13712_SHEAR | Down | -0.3733919076 |
| GSE13712_STATIC | Down | -0.2895697149 |
| GSE19018 | Up | 0.1426743451 |
| GSE19899_A1 | Down | -0.2815638149 |
| GSE19899_A2 | Down | -0.0433238594 |
| PubMed_21979375_A1 | Down | -0.3535645609 |
| PubMed_21979375_A2 | Down | -0.1905404565 |
| GSE35957 | Up | 0.1354569615 |
| GSE36640 | Up | 0.1701168459 |
| GSE54402 | Down | -0.0640803399 |
| GSE9593 | Up | 0.1509430678 |
| GSE43922 | Up | 0.0309926519 |
| GSE24585 | Up | 0.0578477581 |
| GSE37065 | Up | 0.0692580497 |
| GSE28863_A1 | Up | 0.2790120570 |
| GSE28863_A2 | Up | 0.2956832813 |
| GSE28863_A3 | Down | -0.8317306585 |
| GSE28863_A4 | Down | -0.4745886772 |
| GSE48662 | Down | -0.2529869805 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-877-3p | MIMAT0004950 | MIRT036820 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
