HCSGD entry for ABCA6
1. General information
| Official gene symbol | ABCA6 |
|---|---|
| Entrez ID | 23460 |
| Gene full name | ATP-binding cassette, sub-family A (ABC1), member 6 |
| Other gene symbols | EST155051 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0006810 | Transport | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016887 | ATPase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0091934311 | 0.9371282854 | 0.2455770791 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1757220584 |
| GSE13712_SHEAR | Up | 0.2692312904 |
| GSE13712_STATIC | Up | 0.0452571646 |
| GSE19018 | Up | 0.0504539301 |
| GSE19899_A1 | Up | 0.2838868924 |
| GSE19899_A2 | Up | 0.0804018530 |
| PubMed_21979375_A1 | Up | 0.2496351072 |
| PubMed_21979375_A2 | Up | 0.0907363507 |
| GSE35957 | Down | -0.0277037170 |
| GSE36640 | Up | 0.0171979795 |
| GSE54402 | Down | -0.5112270036 |
| GSE9593 | Up | 0.5233820417 |
| GSE43922 | Up | 0.1277212691 |
| GSE24585 | Up | 0.4189249277 |
| GSE37065 | Up | 1.0020467366 |
| GSE28863_A1 | Up | 1.0439234373 |
| GSE28863_A2 | Up | 1.2450476174 |
| GSE28863_A3 | Up | 0.2005574952 |
| GSE28863_A4 | Up | 0.0906476533 |
| GSE48662 | Up | 0.4228122888 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029708 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
