HCSGD entry for ABCB10
1. General information
| Official gene symbol | ABCB10 |
|---|---|
| Entrez ID | 23456 |
| Gene full name | ATP-binding cassette, sub-family B (MDR/TAP), member 10 |
| Other gene symbols | EST20237 M-ABC2 MTABC2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005215 | Transporter activity | NAS | molecular_function |
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0005743 | Mitochondrial inner membrane | IBA | cellular_component |
| GO:0005886 | Plasma membrane | IRD | cellular_component |
| GO:0006200 | ATP catabolic process | IBA | biological_process |
| GO:0006810 | Transport | NAS | biological_process |
| GO:0006857 | Oligopeptide transport | IBA | biological_process |
| GO:0008152 | Metabolic process | IBA | biological_process |
| GO:0015421 | Oligopeptide-transporting ATPase activity | IBA | molecular_function |
| GO:0015833 | Peptide transport | IBA | biological_process |
| GO:0032592 | Integral component of mitochondrial membrane | IDA | cellular_component |
| GO:0035672 | Oligopeptide transmembrane transport | IBA | biological_process |
| GO:0042803 | Protein homodimerization activity | IEA | molecular_function |
| GO:0042886 | Amide transport | IBA | biological_process |
| GO:0055085 | Transmembrane transport | IBA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9761395502 | 0.0025388663 | 0.9999902473 | 0.0993071322 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -1.0456037867 |
| GSE13712_SHEAR | Up | 0.1841991352 |
| GSE13712_STATIC | Up | 0.2750052310 |
| GSE19018 | Down | -0.0552045031 |
| GSE19899_A1 | Down | -1.9884639211 |
| GSE19899_A2 | Down | -0.8229036851 |
| PubMed_21979375_A1 | Down | -0.8566806160 |
| PubMed_21979375_A2 | Down | -1.2696595691 |
| GSE35957 | Down | -0.2151366214 |
| GSE36640 | Down | -0.6584295955 |
| GSE54402 | Down | -0.9521513609 |
| GSE9593 | Down | -0.3711111246 |
| GSE43922 | Down | -0.2149574361 |
| GSE24585 | Down | -0.3127599978 |
| GSE37065 | Down | -0.1693433237 |
| GSE28863_A1 | Down | -0.2209693610 |
| GSE28863_A2 | Down | -0.1713010276 |
| GSE28863_A3 | Up | 0.4728119484 |
| GSE28863_A4 | Up | 0.1684645481 |
| GSE48662 | Down | -0.5715786577 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024476 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026891 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-30a-5p | MIMAT0000087 | MIRT028616 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-24-3p | MIMAT0000080 | MIRT030557 | Microarray | Functional MTI (Weak) | 19748357 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT032488 | Proteomics | Functional MTI (Weak) | 18668040 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
