HCSGD entry for SLC44A1
1. General information
| Official gene symbol | SLC44A1 |
|---|---|
| Entrez ID | 23446 |
| Gene full name | solute carrier family 44, member 1 |
| Other gene symbols | CD92 CDW92 CHTL1 CTL1 RP11-287A8.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005741 | Mitochondrial outer membrane | IEA | cellular_component |
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0006644 | Phospholipid metabolic process | TAS | biological_process |
| GO:0006656 | Phosphatidylcholine biosynthetic process | TAS | biological_process |
| GO:0015220 | Choline transmembrane transporter activity | TAS | molecular_function |
| GO:0015871 | Choline transport | TAS | biological_process |
| GO:0016021 | Integral component of membrane | IEA TAS | cellular_component |
| GO:0034220 | Ion transmembrane transport | TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0046474 | Glycerophospholipid biosynthetic process | TAS | biological_process |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1827740815 | 0.0215745982 | 0.8364597010 | 0.2837565455 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1055587690 |
| GSE13712_SHEAR | Down | -1.2012426966 |
| GSE13712_STATIC | Down | -0.7149636861 |
| GSE19018 | Up | 0.3359846117 |
| GSE19899_A1 | Down | -0.3500353145 |
| GSE19899_A2 | Down | -0.8340637043 |
| PubMed_21979375_A1 | Down | -0.8917787146 |
| PubMed_21979375_A2 | Down | -0.2900433147 |
| GSE35957 | Down | -0.7191863928 |
| GSE36640 | Up | 0.4340953481 |
| GSE54402 | Down | -0.5136350275 |
| GSE9593 | Up | 0.4127146300 |
| GSE43922 | Up | 0.0636580889 |
| GSE24585 | Up | 0.2349538041 |
| GSE37065 | Up | 0.2086931503 |
| GSE28863_A1 | Up | 1.5001548360 |
| GSE28863_A2 | Up | 1.0079066135 |
| GSE28863_A3 | Down | -0.9447898169 |
| GSE28863_A4 | Down | -0.1815251177 |
| GSE48662 | Up | 0.0710915819 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT003770 | Microarray | Functional MTI (Weak) | 15685193 |
| hsa-miR-1 | MIMAT0000416 | MIRT003770 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-1 | MIMAT0000416 | MIRT003770 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-130b-3p | MIMAT0000691 | MIRT020227 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022442 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-122-5p | MIMAT0000421 | MIRT023254 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-19b-3p | MIMAT0000074 | MIRT031133 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | NA | hsa-miR-1 | 15685193 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
