HCSGD entry for TDRD7
1. General information
| Official gene symbol | TDRD7 |
|---|---|
| Entrez ID | 23424 |
| Gene full name | tudor domain containing 7 |
| Other gene symbols | CATC4 PCTAIRE2BP RP11-508D10.1 TRAP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0002089 | Lens morphogenesis in camera-type eye | IMP | biological_process |
| GO:0003729 | MRNA binding | IDA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | ISS | cellular_component |
| GO:0005759 | Mitochondrial matrix | IEA | cellular_component |
| GO:0007281 | Germ cell development | IEA | biological_process |
| GO:0007283 | Spermatogenesis | ISS | biological_process |
| GO:0010608 | Posttranscriptional regulation of gene expression | IMP | biological_process |
| GO:0033391 | Chromatoid body | ISS | cellular_component |
| GO:0035770 | Ribonucleoprotein granule | IDA | cellular_component |
| GO:0043186 | P granule | IEA | cellular_component |
| GO:0047485 | Protein N-terminus binding | IEA | molecular_function |
| GO:0070306 | Lens fiber cell differentiation | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1489678470 | 0.0541095475 | 0.7730644125 | 0.4383556171 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0435565027 |
| GSE13712_SHEAR | Up | 0.7810978481 |
| GSE13712_STATIC | Up | 0.7571289778 |
| GSE19018 | Down | -0.0051681361 |
| GSE19899_A1 | Down | -0.4125419055 |
| GSE19899_A2 | Down | -0.9793604602 |
| PubMed_21979375_A1 | Down | -0.1613127211 |
| PubMed_21979375_A2 | Down | -0.5408996154 |
| GSE35957 | Down | -1.2713039008 |
| GSE36640 | Up | 0.4345296772 |
| GSE54402 | Down | -0.9187872322 |
| GSE9593 | Up | 0.4698883083 |
| GSE43922 | Down | -0.2622262995 |
| GSE24585 | Up | 0.6855491305 |
| GSE37065 | Up | 0.7290966378 |
| GSE28863_A1 | Down | -0.1340851580 |
| GSE28863_A2 | Up | 0.3920698827 |
| GSE28863_A3 | Down | -0.8343383732 |
| GSE28863_A4 | Up | 0.1800492089 |
| GSE48662 | Down | -0.2366870892 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT030170 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-let-7e-5p | MIMAT0000066 | MIRT051693 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
